L. vannamei and genome scale models
WebOct 27, 2015 · Genome survey of L. vannamei Three paired-end DNA libraries with insert sizes of 170 bp, 300 bp and 500 bp were constructed and sequenced for the genome survey analysis. A total of 138.77... WebSep 6, 2024 · We provide the raw and processed data produced during the genome sequencing of isolates from six species of parasites from the sub-family Leishmaniinae: …
L. vannamei and genome scale models
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WebMay 12, 2024 · Reconstruction of Litopenaeus vannamei Genome-Scale Metabolic Network Model and Nutritional Requirements Analysis of Different Shrimp Commercial Varieties. … WebAug 22, 2024 · Introduction. Litopenaeus vannamei is naturally distributed along the Pacific coast of Central and South America. It is an important farmed penaeid shrimp that provides approximately 80% of the world’s total penaeid shrimp output ().Semi-intensive and intensive cultivation methods are often adopted in the cultivation of L.vannamei to realize large …
WebApr 1, 2024 · Fine-Scale Characterization of Genomic Structural Variation in the Human Genome Reveals Adaptive and Biomedically Relevant Hotspots Genome Biol Evol. … WebTo test whether penaeid shrimp has underwent whole-genome duplication, a series of analyses were carried out on the genome sequencing data of L. vannamei. Firstly, we …
WebMay 12, 2024 · As an important tool for systematic analysis, genome-scale metabolic network (GSMN) model has been widely used in various organisms. However, there are … WebJan 11, 2024 · In silico prediction of potential indigenous microbial biomarkers in Penaeus vannamei identified through meta-analysis and genome-scale metabolic modelling Toward this, we collected and re-analysed the amplicon sequence data of P. vannamei (encompassing 117 healthy and 142 disease datasets).
WebMay 11, 2024 · Table_3_Reconstruction of Litopenaeus vannamei Genome-Scale Metabolic Network Model and Nutritional Requirements Analysis of Different Shrimp …
WebDec 20, 2024 · Genome-wide and large sub-genome loss of function CRISPR screens are increasingly important tools for understanding gene function in both normal and disease states. ... ν cj L (0) is the model estimate of the normalized number of ... Bryan JG, et al. Improved estimation of cancer dependencies from large-scale RNAi screens using … dbk automobileLitopenaeus vannamei, also known as South American white-leg shrimp, is naturally distributed in the pacific coastal waters from northern Peru to Mexico. It has … See more Genome-scale metabolic network has become an indispensable tool for systematic research on metabolism and applied to many microorganisms and model organisms. … See more CG analyzed the data and wrote the manuscript. JY and JL organized the data. JS and TH designed the experiment and revised the manuscript. All authors contributed to the article and approved the submitted version. See more The original contributions presented in the study are included in the article/Supplementary Material, further inquiries can be … See more bbp louisianaWebApr 20, 2024 · Gastric cancer (GC) is one of the most lethal cancers worldwide; it has a high mortality rate, particularly in East Asia. Recently, genetic events (e.g., mutations and copy number alterations) and molecular signaling associated with histologically different GC subtypes (diffuse and intestinal) have been elucidated. However, metabolic differences … dbk gokuWebJun 28, 2024 · Background Genome-scale metabolic network models (GEMs) provide an efficient platform for the comprehensive analysis the physical and biochemical functions of organisms due to their systematic perspective on the study of metabolic processes. Eriocheir sinensis is an important economic species cultivated on a large scale because … dbk glarusWebApr 11, 2024 · Genome sequencing, assembly, and annotation. The genome size of the haploid line (Supplementary Fig. 1b, d) was estimated to be approximately 8.47~8.88 Gb … dbk infraprojectsWebOct 1, 2016 · The performance of GS models in L. vannamei was evaluated in a population consisting of 205 individuals, which were genotyped for 6 359 single nucleotide polymorphism (SNP) markers by specific length amplified fragment sequencing (SLAF-seq) and phenotyped for body length and body weight. dbk privateWebTo date, genome-scale metabolic reconstructions for more than 30 organisms have been published and this number is expected to increase rapidly. However, these … bbp meaning bank